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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907870.1_cds_XP_016457959.1_51631
CDS Infomation

[gene=LOC107781733] [db_xref=GeneID:107781733] [protein=lysosomal Pro-X carboxypeptidase-like isoform X1] [protein_id=XP_016457959.1] [location=complement(join(2950..3080,3366..3415,3696..3775,3884..4036,5097..5252,6204..6327,6435..6547,7543..7676,9004..9184,9871..10242))] [gbkey=CDS]
Sequence

ATGGCTTTTTCTTCTTCTTATTTTTCTTTCATTTTCTTGATTTTACTGTTTATTATCTCT
TTTGTAGTTGGAGAAATTAAGCCAATTTATCTACCTGGAACTTATCAATCTTCATTAGAA
AAACAACATGTCAAGTCAAAAATACCATTTAAAGTCCATTACTTTCCTCAAATTCTTGAC
CATTTCACTTTTCTACCAAAGAGTTCTAAAGTTTTTAAACAGAAATATCTCATAAATGAT
AATTATTGGAAACAAGGAGGCCCTATCTTTGTCTACACTGGAAATGAAGGAAATATTGAT
TGGTTTGCTGCAAATACTGGATTTATGCTTGATATTGCTCCTAAGTTTCATGCTCTTCTA
GTCTTCATTGAACATAGGTTTTATGGGGATTCAATGCCATTTGGAAAGAAATCTTACAAG
TCACCAAAGACTTTGGGATACTTGAATTCACAGCAAGCATTGGCTGATTATGCTGTTCTA
ATAAGGAGTTTAAAGCAGAATCTTTCTTCTGAATCATCACCGGTTGTGGTTTTTGGTGGC
TCTTATGGAGGAATGTTGGCTTCTTGGTTTAGATTGAAGTACCCACATATAGCAATAGGT
GCAGTGGCATCTTCAGCACCAATCTTGCAGTTTGACAAAATCACCCCATGGTCAAGCTTT
TATGATGCTGTTTCCCAAGATTTCAAGGAGGTAAGCTTGAATTGTTATAGAGTGATAAAG
GGAAGTTGGACAGAGTTGGATGCTTTATCAAAACATGAAGAAGGCTTGACTGAAGTTAGT
AAACTTTTCAGAACTTGCAAGGGTTTACATTCAGTTTATTCAGCTAGAGATTGGCTATGG
GAAGCTTTTGTATATACAGCAATGGTGAATTATCCTACTAAAGCCAACTTTATGATGCCA
TTGCCAGCATATCCAGTACAAGAGATGTGCAAGATAATTGATGGATTACCAAAAGGAGCT
TCCAAAATCAGCCGGGCATTTGCTGCGGCAAGTTTATATTACAATTATACAAAAAGAGAA
AAATGTTTCAATTTAGAAGGTGGTGATGATGCTCATGGTCTTCGTGGTTGGGATTGGCAG
GCATGTACAGAGATGGTTATGCCAATGACTTGTTCAAATGAAAGCATGTTTCCTCCATCT
TCCTATAGTTACAAGGAATTCAAAGAAGATTGCAAAAAGAAATATGGAGTAGAGCCTCGA
CCACATTGGATCACTACTGAATTTGGTGGCTATAGAATTGAGCAAGTTCTTAAGAGATTT
GGCAGTAATATGATATTCTCTAACGGAATGCAAGATCCATGGAGCAGAGGAGGTGTGCTG
AAAAATATATCAGCTAGCATTGTGGCACTCGTAACTCAAAAAGGTGCACACCATGTTGAC
TTTCGTTCTGAGACAAAGAATGACCCTGGCTGGTTGATCATGCAAAGGAAGCAAGAAGTG
GCTATTATTCAAAAGTGGTTAGAAGAGTACTATAGAGATCTCAAACAAAATTAG

Peptide Sequence

PEP ID

XP_016457959.1
PEP Infomation

PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Nicotiana tabacum]
Sequence

MAFSSSYFSFIFLILLFIISFVVGEIKPIYLPGTYQSSLEKQHVKSKIPFKVHYFPQILD
HFTFLPKSSKVFKQKYLINDNYWKQGGPIFVYTGNEGNIDWFAANTGFMLDIAPKFHALL
VFIEHRFYGDSMPFGKKSYKSPKTLGYLNSQQALADYAVLIRSLKQNLSSESSPVVVFGG
SYGGMLASWFRLKYPHIAIGAVASSAPILQFDKITPWSSFYDAVSQDFKEVSLNCYRVIK
GSWTELDALSKHEEGLTEVSKLFRTCKGLHSVYSARDWLWEAFVYTAMVNYPTKANFMMP
LPAYPVQEMCKIIDGLPKGASKISRAFAAASLYYNYTKREKCFNLEGGDDAHGLRGWDWQ
ACTEMVMPMTCSNESMFPPSSYSYKEFKEDCKKKYGVEPRPHWITTEFGGYRIEQVLKRF
GSNMIFSNGMQDPWSRGGVLKNISASIVALVTQKGAHHVDFRSETKNDPGWLIMQRKQEV
AIIQKWLEEYYRDLKQN

Transcript Sequence

Gene sequence data has not been registered.